So I fixed the jamming issue. Turns out my nozzles were just clogged up. Apparently clearing the filament after a jam doesn't really clear ALL the filament out. I ended up purchasing some Plated Nozzles and swapped out the Blue print card and it's printing like a dream again. I've since changed the way I switch filament. I now just snip it at the top of the stepper motor and feed the new filament in after the old. Works MUCH better.

In terms of warping, I've found that my prints warp much more when the sides are off rather than leaving everything closed in. So far I haven't had any warping when everything is closed in. I print at 200C with a bed at 60C. We have a makerbot at work that barely gets used because they guy who bought it no longer works with us, but I couldn't ever get good prints off of it.

If I'm missing something I'll take any advice I can get. Thanks, T.